Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss2140986	TSC-CSHL|TSC0498316		fwd/B	C/T	ctacagattcaatgaaatccctaccaaaat	cccagttgttgttgttttttttttgcagaa	10/19/00	10/10/03	88	Genomic			95 %
ss8364368	SC_SNP|NT_011387.8_333978		rev/T	A/G	ttctgcaaaaaaaaaacaacaacaactggg	attttggtagggatttcattgaatctgtag	04/17/03	10/10/03	114	Genomic			unknown
ss10955763	BCM_SSAHASNP|chr20.NT_011387.8_333978		rev/T	A/G	ttctgcaaaaaaaaaacaacaacaactggg	attttggtagggatttcattgaatctgtag	06/30/03	05/16/04	116	Genomic			unknown
ss12483854	WI_SSAHASNP|chr20.NT_011387.8_333978		rev/T	A/G	ttctgcaaaaaaaaaacaacaacaactggg	attttggtagggatttcattgaatctgtag	07/04/03	10/10/03	116	Genomic			unknown
ss21779776	SSAHASNP|WGSA-200403-chr20.chr20.NT_011387.8_333978		rev/T	A/G	ttctgcaaaaaaaaaacaacaacaactggg	attttggtagggatttcattgaatctgtag	03/20/04	03/20/04	121	Genomic			unknown
ss41391768	ABI|hCV1273466		rev/T	A/G	ttctgcaaaaaaaaaacaacaacaactggg	attttggtagggatttcattgaatctgtag	07/17/05	07/17/05	126	Genomic			unknown
ss91612476	BCMHGSC_JDW|JWB-1408819		rev/T	A/G	ttctgcaaaaaaaaaacaacaacaactggg	attttggtagggatttcattgaatctgtag	02/26/08	03/02/08	129	Genomic			unknown

Fasta sequence   (Legend)

 CTCTCAAAAC TCAGGTTCTG ACCCAGCAAG TCTGAGGTGA GACCTGAGAT TCCCCCCATG
 TTGTGGTCCA CAGGCCACAC TTTAGTAGCA AGATGGTGGC TGACATTGTA CATTTTACAA
 AGGAAACGCC AGTGCCAGTT AGTTAATTCA GGGGATCAAG TGGAAGTCAA CTGGGAAAGT
 GTCCACAATG ATACTTCaac aaaaaaagta aggaaaagga aaggtggaag atgagtatgt
 taacttcctc atttttcata gcaaggagta cacaggtact gtctcaaGCA atcatttcaa
 gaagtagata tctcaatatt ttgtttaaaa tcaagtggcc aatgatctac agattcaatg
 aaatccctac caaaat
 Y
 cccagttgtt gttgtttttt ttttgcagaa acagacaagc tgatcgtaaa atttatatgg
 aaattcaaga gacttgcaat aaccaaaaca atattgaaaa agaacaaaag ttggagaact
 tgtatttcct gatttcaaat actatgaagc tatagtaatt agtgtggtac tggcgtaagg
 gcagatatat attatagttc aatggtatag aaatgagagt ccagaaataa gcactcacat
 ttatggtcaa ttaatttcca aaaagggtta agatgattaa acagaggaaa acagccttaa
 caaatagtgc cggcacaact caatatccac gtgcaaaaga atgaagctgg acccttacct
 cacaccttat ataaaaatta aatcaaaatg gaccaaagac ctaaatgtaa gagctaaaac
 cataaaatct ttagaagaaa atatagaggt aaatcttcat gaccttggat gaggcaacga
 tttcttagat atgacaccaa aagcacaaac aacaaaataa aacatagact aactggacat
 catcaaaatt taaaactttt gtggttcaaa ggataccatc aacaaagtga gaagacaatc
 cacagaatga gagaaaattt ttgcaaatca tgtagctgat aagctaaaat gaataaagta
 cttctagcta aaatgaataa agtactccta caactcaata taaaaacata aacccagccg
 ggtgcagtgg ctcatgcctg taatcccaac actttggaaa ggccaaggtg ggtggatcac
 ctgaggtcag gagttcaaga ccagcctggc caacatggta agacccgtct ctactaaaaa
 tacaaaaatt agccagtgta gtggtgggca cctgtaatcc agctactcag gaggctgggg
 caggagaatc acttgaacct gggaggcgga ggttgcagtg agccgagatt gcaccattgc
 actcctgctt gggtgacaga gcgagactcc atctcaaaaa aaaaaaaaga taaacccaat
 tttaaaatgg gcaaaagacc tgaataggca aacctccaaa gaaaatatgt gcatgaaaag
 atgcttaaca tcatttgtca tcaaatggtt aggaaattgc aaatcaaaac cacagtgaga
 tacctcttca aacttactag gatggctata atcaaaaaga taaacaacaa caagtattag
 agatgatgtg gagaaactag aaccctcata tatgctggtg ggaatgtaaa atggtgcagc
 cactttggaa aactgtctgg catttcttca aaaagtaaca tagagttact gtatgaccca
 gcaattccac tgctagtgtg tatccaagag aaatgaaaac gtgtccacac aaaaagttgg
 acacaaatgt tcacggcagc attgtttata atagccaaaa aatagaaaca cccaaatgtc
 catcaactga tttaatgagt aaagataatg agatatgtct atacaataga ttattatttg
 gcaataaaaa ggaataaagt tctggttggg catggtggct cacacctgta atcccagcac
 tttgagaggc tgaggtggga agactgctta agccagaagt tcaagaccag cccagacaac
 aaagcaagac cttatctcta cagactttct aaaaattagc caggtgtggc tgggtgtggt
 ggctcacgcc tgtagtccca gcacattggg aggcataggc gggcggatca cgaggtcagg
 agatggagac catcctggtt aacacggcga aaccccgtct ctactaaaaa tacaaaaaat
 tagctgggcg tggtggcggg cgcctgtagt cccagctact cgggaagctg aggcaggaga
 atggcgtgaa cctgggaggt ggagcttgca gtgagctgag atcgcgccac tgcactccag
 cctgggggac agagtgagac tcccatctca aagaaaaaaa aaattagccg ggtgtggtgg
 tacatgccag tagtcccagc tacctgggag gccaaggcag gaggactgct tgaatccagg
 aagttgaggc tgtagtgagc gatgatggca ccactgcact tcaacctaga caagagaccc
 catgtcaaaa aaaaaaaggg gaatgaagtt gttagacatg ctacaacatg gatgaatctc
 gaaaacgatc ctaagtgaaa gaagccagat acaaaaggcc acatattgca tgattcaact
 tatatggaat ttccagaagg tagatcccta gagataaaaa gtagattagt ggttgcctaa
 ggttggggag ttagggaaaa ggtagagaga tgaggactgg ctgctaatga gtaccaggtt
 tctttacagg atgatgaaaa tgttctaaaa ttgattgtgg caatggttgc acaaccttga
 atatactaaa agccattgaa ctgtatactt taaatggtcg aactgtaagg ataaataaat
 aaataaaact gttttaagaa AAACCAAATG GGACCCACCA AGAGAACCAA AAATCAGAAA
 CCATAAAACT ATTGCCTTAC TATCCAGTAA TGAAAAAGCA GTCAAAAAAT AACGATAGAC
 ACTAATGTTT ATTATTGAGT GCATAACACG CCAGGCATTG TGCAAAGTGT TTCAGCATTG
 AGTTTAAGTC TCCTGGAGCA CAGACCGACA GTATCCATTC

GeneView

Group Label	Contig->mRNA	Gene Model (contig mRNA transcript) Color Legend
reference	NT_011387->NM_006462 sv function
reference	NT_011387->NM_031229 sv function
HuRef	NW_001838652->NM_006462 sv function
HuRef	NW_001838652->NM_031229 sv function
Celera	NW_927317->NM_006462 sv function
Celera	NW_927317->NM_031229 sv function

Integrated Maps:

NCBI Resource Links

Population Diversity

	Sample Ascertainment				Genotypes	Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	HWP	C	T
ss10955763	CEPH		184	AF		0.770	0.230

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
DoubleHit found by:  BCM_SSAHASNP, NCBI	UNKNOWN	UNKNOWN	UNKNOWN